It is not so trivial after all. In general you need not have $TY=Y$. ($TY\subset Y$ is trivially true).
Example: We will define $X$ as a subset of ${\Bbb N}_0^2$ and a dynamical system on it.
Set $\Omega_0=\{(0,0),(0,1),...\}$ and
for $n\geq 1 : \Omega_n = \{ (n,1),...,(n,n)\}$.
We let $X=\bigcup_{n\geq 0} \Omega_n$. The dynamics is as follows:
$T(0,k)=(0,k+1)$ (a right shift) and for $2\leq k\leq n : T(n,k)=(n,k-1)$ (a left shift at level $n$). Finally $T(n,1)=(0,0)$, $n\geq 1$.
Then $Y=\bigcap T^n X=\Omega_0$ but $TY$ does not contain the point $(0,0)\in Y$.
Perhaps an intuitive explanantion of what is going on may help: $T$ defines a right shift on $\Omega_0$. Now, for every $n\geq 1$ the chain $\Omega_n$ is nilpotent (becomes empty after $n+1$ iterations), so will not belong to $Y$. On the other hand $(0,0)$ is in the image of $T^n X$ for every $n\geq 1$, so $Y=\Omega_0$. But $(0,0)$ has no preimage in $Y$.