Maximum Parsimony Phylogenetic Tree Search Results


Summary

Date/time:   Fri Oct 24 15:29:06 EDT 2008
Program:   edu.rit.compbio.phyl.PhylogenyParsBnbHyb
Computer:   <unknown>
Parallel threads:   1
Sequence file:   iguana18a.phy
Number of sequences:   11
Number of sites:   900
Number of informative sites:   98
Parsimony score initial bound:   335
Maximum trees saved:   100
Number of trees:   38
Number of state changes:   331

Sequences
Distances
Trees


Sequences

Sequences in interleaved PHYLIP format:  sequences.phy

Notes:
♦  Number of sequences: 11
♦  Number of sites: 900
♦  Number of informative sites: 98
♦  Informative sites marked

11 900
SOOBESUS16 ACTCATCGAC CTACCCGCCC CCTCCAATAT TTCTGCATGA TGAAACTTCG GCTCACTACT
SOTOWNSE22 .......... .......... .......... .......... .......... ....C.....
SOTUMIDU18 .......... .......... .......... .......... .......... ..........
SOOBESUS07 .T........ .......... ....T..... C......... .......... ..........
SHISPIDUS1 .T........ .......... .......... C......... .......... ..........
SAVARIUS06 .T........ .......... .......... C......... .......... ..........
SAUSTRALI9 .T........ ..G....... .T........ C......... ..G....... .......G..
SAKLAUBE10 .T........ ......A... .T........ C......... ..G....... .......G..
SASLEVIN13 .T........ ......A... .......C.. C......... ..G....... ..........
IGIGUANA23 .T........ ..G....... .......C.. C......... .......... ..........
CSIMILIS25 .T........ ..C..AA... .A.....C.. C......... .......... ..........

CGGACTCTGC CTAATCATCC AAATCCTAAC AGGCCTATTC CTAGCCATAC ACTACACCGC AGACATCTCA
T......... .....T.... .......... .........T .......... .......... ..........
T......... .......... .......... .......... .......... .......... ..........
T......... .....T.... .......... .........T .......... .......... .........C
T......... .......... .......... ...A...... .......... .......... .........T
T......... .......... ..G....... .......... .......... .......... .........T
T......... .......... .......... .........T .......... .......... .........T
T......... .......... .......... .........T .......... .......... .........T
T......... .......... .......... .........T .......... .......... .........T
A.....T... ........A. ...C...... ...T..C... .......... .......... ..........
G......... ......G.A. .......... C.....T... .......... .......... ..........

TCAGCCTTCT CATCAGTCGC CCACATCTGT CGAGACGTCC AATATGGCTG ACTCATTCGA AACCTGCACG
.T........ .....A.... .......... ...A...... .......... .......... .....A....
.......... .....A.... .......... .......... .......... ......C... .....A....
.......... .......T.. .....C...C ..G....... .......... ......C... .....A....
.......... .......T.. .....C.... .......... .......... ......C... .....A....
.......... .......T.. .....C.... ..GA...... .......... ......C... .....A....
.......... .......T.. .....C.... .......... .......... ...T..C... .....A....
.......... .......T.. .....C.... .......... .......T.. ......C... ..........
.......... .....A.T.. .....C...C .......... .......... ......C... .....A....
..G....... .......A.. A........C .......... ..C.C..... ...A..C... ..........
.......... .......A.. .......... ........A. .......... ......C... .....A..T.

CCAACGGAGC CTCAATATTC TTCATCTGCC TCTACCTTCA CATTGGACGA GGCCTCTACT ACGGCTCCTA
.......... .......... .......... .......... .......... .......... ..........
.......... .......... .......... .......... ......G... .......... ..........
.......... .....C.... .......... .......... ...C...... .......... ..........
.......... .......... .......... .......... ...C...... .......... .T........
.......... .......... .......... .......... ...C.....G .......... .T........
.......... .......... .......... .......C.. ...C...... .......... ..........
.......... .......... .......... .......... ...C...... .......... ..........
.......... .......... .......... .......... ...C..G... .......... ..........
.T........ .......... .......... .T.....C.. ...C...... .....G.... .......A..
.......... .......... ..T....... .A.....C.. .G.A...... ..A..T.... ....A..T..

CTTATTCAAA GAAACCTGAA ACATCGGAGT AGTACTACTT CTGCTAGTAA TGGCCACAGC ATTCGTAGGC
.......... .....T.... .......... .......... .......... .......... ..........
.......... .....T.... .......... .......... .......... .......... ..........
.......... .......... .......... .........C ..A....... .......... ..........
.......... .......... .......... .......... .....G.... .......... ..........
.......... .......... .......... .......... .......... .......... ..........
.......... .......... .......... ...G.....C ..A....... .......... ..........
.......... .......... .......... .C.G..G... ..A....... .A........ ..........
.C........ .......... .......... ...G...... ..A..G.... ....T..... ..........
.C........ .......... ....T..... .A.C.....A ..A....... .A........ C.........
.C........ .....A.... ..C.T..... .A.C...... ..A....... .A.....T.. ..........

TACGTCCTAC CCTGAGGCCA AATATCCTTC TGAGGAGCCA CAGTCATCAC CAACCTACTC TCCGCCATCC
.......... .......... .......... .......... .......... .......... ..G.......
..T....... .......... .......... .......... .......... .......... ..........
.......... .......... .......... .......... .......... .......... ......G...
.......... ....G..... .......... .....G.... ....T..... .......... .....T....
.......... ....G..... .......... .....G.... .G........ .......... ..........
.......... .......... .......... .....G.G.. .......... ...T...... ..........
.......... .......... .......... .....G.... .......... .......... ..........
.......... .......... .......... ..G..G.... .......... .......... ..........
..T....... .......... .......... .....C.... .......A.. ......C..A ..........
.....A.... .......... .......... .....C.... ....T..T.. .........A .....T....

CATACGTGGG AACCACCCTA GTAGAATGAA TCTGAGGAGG ATTCTCAGTA GATAGCGCCA CCCTAACTCG
.......... GG........ .......... .......G.. G......... ....A..... ..........
.......... .......... .......... .......G.. .......... ....A...G. ..........
.......A.. .G........ .....G.... .......G.. G......... ..C.A..... ..........
.......A.. .GG......G .....G.... .......G.. G......... ..C.A..... ..........
.......A.. ..G......G .......... .......... .......... ..C.A..... ....G.....
.......A.. G......... .......... .......... .......... ..C.A..... ..........
.......A.. G......... ..G....... .......G.. .......... ..C.A...T. ..........
.......A.. .......... .......... .......... .......... ..C.A..... ..........
.C..T..A.. .G........ .......... ....G..G.. .......... ..C.A..... .......C..
....T..A.. C.....T... .......... .......... ...T...... ..C.AT.... ....C..C..

ATTCTTCACA TTCCACTTCC TACTACCCTT CATAATCATC GGACTAACCA TGATACACCT ACTCTTCCTT
.......... ..T....... ....G..... .......... .......... .......... ..........
.......... ..T....... ....G..... .......... .......... .A....T... ..........
.......... ..T....... .......... .......... .......... .A........ ...T.....C
.......... ..T.....T. .......... .G........ .......... .A........ ...T.....A
.......... ..T....... .......... .G........ .......... .A........ ...T.....A
.......... ..T....... .......... .......... ..G.....T. .A........ ..........
.......... ..T....... .......... .......... ........T. .A........ ..........
.......... ..T....... .......... ...G...... ........T. .A........ ..........
.......... .......... .......... ........C. .CC.....A. .AC....... .........C
.......... ..T....... .C..C..A.. ..C...T... ...A..G... .CC.C..... C.....T..C

CACGAAACAG GATCAAACAA CCCAACCGGA CTCAACTCCA ACCCAGACAA AATCCCATTT CATCCCTACT
.......... .......... .......... .......... .......T.. .......... ..........
.......... .......... .......... .......... .......... .......... ..........
........G. .......... .......... .......... G......... .......... ..C.......
.......... .......... .......... .......... G......... .......... ..C.......
.......G.. .......... .......... .........G G......... .......... ..C.......
.......... .......... .......... .......... .......... .......... ..C.......
.......... .......... .......... .......... .......... .......... ..C.......
.......... .......... .......... .......... G......... .......... ..C.......
.......... .......... ......T... ..T..T.... .......... .G.......C ..C..A....
.......... .......... T..C..T... A....T.... .......... .........C ..C..A....

TCTCCTACAA AGACCTCCTA GGGGCCACCC TAATAATTAT CCTACTACTC ACCCTAACTC TCTTCTCACC
.......... .......... .......... .......C.. ...G...... .......... ..........
.......... .......... .......... .......... .......... ........C. ..........
.......... .......... .......... .......C.. .......... ......G... ..........
.......... .......... .......... .......C.. .......... ......G... ..........
.......... .......... ..A....... .......C.. .......... ......G... ..........
.......... ......T... ..A....T.. .......C.. .......... ......G.C. ..........
.......... ......T... .......... .......C.. ..C....... .....GG.C. ..........
.......... .......... ..A....... .......C.. .......... ......G.C. .G........
.......... ......A... ......CT.T .......... .GCC..C... ..T..GG.C. .A....T...
.T........ ......A... ..A..A..T. .......A.. .TCC..C..A .G....G.C. .A..T.....

AAACCTCCTA GGCGACCCAG AAAACTTTAC ACCCGCCAAC CCACTAGTCA CGCCCCCCCA CATCAAACCA
.......... .......... .......C.. .......... .......... .A........ ......G...
......T... .......... .......... G......... .......... .......... ......G...
.......... .......... .......... .......... .......... .A........ ..........
.......... .......... .......... .......... .......... .A........ ......G...
.......... .......... .......... .......... .......... .A........ ......G...
.......... .......... .......... G......... .......... .A..T..... ..........
.......... A......... .......... G........T .......... .A..T..... ..........
.......... .......... .......... G......... .......... .A..T..... ..........
...T..A..G .......... .......C.. C......... ........T. .A........ ...T......
......A..T .......... .......C.. C..A..A..T .......... .A.....T.. ..........

GAGTGGTACT TTCTATTCGC CTATGCCATC CTACGATCCA TTCCCAACAA ACTAGGCGGC GTACTTGCCC
..A....... ....G..... .......... .......... .C..T..... .......... ..........
..AC.A.... .......... ...C...... .......... .C........ .......... ..........
..A..A.... .C........ .......... .....G.... .......... ......T... ..........
..A....... .C........ .......... .......... .......... .......... ..........
.......... .C........ .......... .......... .......... .......... ..........
..A....... .C........ ...C...... ..G....... .......... .......... ..........
..A....... .C..C..... .......... ..G....... .......... .......... ..........
..A..A.... .C........ ...C...... .......... .......... ...G..T... ..........
.......... .C........ ...C...... T......... .C........ .T........ ...T.A...T
..A..A.... .C.....T.. ...C..G... .....C.... .C..A..... ...C..A... ..T..A....

TACTCTTCTC AATTTTAATC CTCATAATCA TCCCCCTCCT CCACCTTTCA AAGCAACGAA GTAACACCTT
.......... .......... .......... .......... ...T...... .......... .C........
.......... .......... .......C.. .......... .......... ..A....... .C........
.......... ...C...... ........T. .......... ......C... ..A....... .C.....T..
.......... .......... .......... .......... ......C... ..A....... .C........
.......... ...C...... .......... .......... ......C... ..A....... .C........
.......... .......... .......... .......... ...T..C... ..A....... .C.....T..
.......... .......... .......... .......... ......C... ..A....... .C.....T..
.......... .......... .......... .......... ......C... ..A....... .C.....T..
.......T.. ...CC....T ......G.TG .T........ T...T.A... ..A....... .C.C...A..
.......... C..CC..... ..A.....TG .G........ A.....A... ..A....... .C.....A..


Distances

Hamming distances:

  SOOBESUS16 SOTOWNSE22 SOTUMIDU18 SOOBESUS07 SHISPIDUS1 SAVARIUS06 SAUSTRALI9 SAKLAUBE10 SASLEVIN13 IGIGUANA23 CSIMILIS25
SOOBESUS16 0 29 26 46 42 42 49 50 50 105 123
SOTOWNSE22 29 0 31 49 47 53 56 58 59 118 129
SOTUMIDU18 26 31 0 50 46 50 51 53 46 108 121
SOOBESUS07 46 49 50 0 30 36 42 45 37 104 120
SHISPIDUS1 42 47 46 30 0 20 43 44 40 109 123
SAVARIUS06 42 53 50 36 20 0 43 48 42 112 124
SAUSTRALI9 49 56 51 42 43 43 0 25 29 102 118
SAKLAUBE10 50 58 53 45 44 48 25 0 34 105 119
SASLEVIN13 50 59 46 37 40 42 29 34 0 106 114
IGIGUANA23 105 118 108 104 109 112 102 105 106 0 115
CSIMILIS25 123 129 121 120 123 124 118 119 114 115 0

Jukes-Cantor distances:

  SOOBESUS16 SOTOWNSE22 SOTUMIDU18 SOOBESUS07 SHISPIDUS1 SAVARIUS06 SAUSTRALI9 SAKLAUBE10 SASLEVIN13 IGIGUANA23 CSIMILIS25
SOOBESUS16 0.00 29.64 26.51 47.64 43.36 43.36 50.87 51.95 51.95 114.13 135.79
SOTOWNSE22 29.64 0.00 31.73 50.87 48.72 55.20 58.46 60.64 61.74 129.70 143.16
SOTUMIDU18 26.51 31.73 0.00 51.95 47.64 51.95 53.03 55.20 47.64 117.69 133.34
SOOBESUS07 47.64 50.87 51.95 0.00 30.69 37.00 43.36 46.57 38.05 112.94 132.13
SHISPIDUS1 43.36 48.72 47.64 30.69 0.00 20.30 44.43 45.50 41.23 118.88 135.79
SAVARIUS06 43.36 55.20 51.95 37.00 20.30 0.00 44.43 49.79 43.36 122.47 137.01
SAUSTRALI9 50.87 58.46 53.03 43.36 44.43 44.43 0.00 25.47 29.64 110.58 129.70
SAKLAUBE10 51.95 60.64 55.20 46.57 45.50 49.79 25.47 0.00 34.89 114.13 130.91
SASLEVIN13 51.95 61.74 47.64 38.05 41.23 43.36 29.64 34.89 0.00 115.31 124.87
IGIGUANA23 114.13 129.70 117.69 112.94 118.88 122.47 110.58 114.13 115.31 0.00 126.07
CSIMILIS25 135.79 143.16 133.34 132.13 135.79 137.01 129.70 130.91 124.87 126.07 0.00


Trees

Trees in Newick Standard format:  trees.txt

Notes:
♦  These are unrooted trees
♦  Each interior node marked with number of state changes at that node
♦  Each branch marked with least squares branch length, Jukes-Cantor distances
♦  Number of trees: 38
♦  Total number of state changes: 331

Tree 1 of 38

(((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:0.0,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)10;

Squared error = 492.1484539134339

Tree 2 of 38

((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,(((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)24:0.0)45;

Squared error = 492.1484539134339

Tree 3 of 38

((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)16:4.279339278686592,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:0.0)11;

Squared error = 492.1484539134339

Tree 4 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)16:4.279339278686592,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)13:0.0,SOOBESUS07:16.105369580641334)21;

Squared error = 492.1484539134339

Tree 5 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592)14:6.0487538833751415,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)15:0.0,SASLEVIN13:14.84336313814439)17;

Squared error = 492.1484539134339

Tree 6 of 38

((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592)14:6.0487538833751415,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:0.0)13;

Squared error = 492.1484539134339

Tree 7 of 38

((((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592)14:6.0487538833751415,SASLEVIN13:14.84336313814439)25:4.683068269248144,SAUSTRALI9:11.344663866356738)16:0.0,SAKLAUBE10:14.130057522064961)16;

Squared error = 492.1484539134339

Tree 8 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592)14:6.0487538833751415,SASLEVIN13:14.84336313814439)25:4.683068269248144,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:0.0)7;

Squared error = 492.1484539134339

Tree 9 of 38

((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)49:13.633071052623361,(SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436)20:0.0,SOTUMIDU18:13.60414548313937)14;

Squared error = 492.1484539134339

Tree 10 of 38

(((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)49:13.633071052623361,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:0.0)20;

Squared error = 492.1484539134339

Tree 11 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)49:13.633071052623361,SOTUMIDU18:13.60414548313937)27:0.6993582651178436,SOOBESUS16:10.672898274202474)15:0.0,SOTOWNSE22:18.968503011498925)21;

Squared error = 492.1484539134339

Tree 12 of 38

((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)49:13.633071052623361,SOTUMIDU18:13.60414548313937)27:0.6993582651178436,(SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.0)7;

Squared error = 492.1484539134339

Tree 13 of 38

((((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)16:4.279339278686592,SOOBESUS07:16.105369580641334)22:7.584820344743772,SAVARIUS06:11.724908478422956)22:0.0,SHISPIDUS1:8.57737380673966)10;

Squared error = 492.1484539134339

Tree 14 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)16:4.279339278686592,SOOBESUS07:16.105369580641334)22:7.584820344743772,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:0.0)12;

Squared error = 492.1484539134339

Tree 15 of 38

((((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592)14:6.0487538833751415,SASLEVIN13:14.84336313814439)25:4.683068269248144,SAKLAUBE10:14.130057522064961)20:11.344663866356738,SAUSTRALI9:0.0)12;

Squared error = 492.1484539134339

Tree 16 of 38

(((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462)49:13.633071052623361,SOTUMIDU18:13.60414548313937)27:0.6993582651178436,SOTOWNSE22:18.968503011498925)23:10.672898274202474,SOOBESUS16:0.0)13;

Squared error = 492.1484539134339

Tree 17 of 38

((((((CSIMILIS25:71.1964642048464,IGIGUANA23:54.87727311690467)115:37.416786534813454,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)59:1.231836069824462,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)16:4.279339278686592,SOOBESUS07:16.105369580641334)22:7.584820344743772,SHISPIDUS1:8.57737380673966)17:11.724908478422956,SAVARIUS06:0.0)15;

Squared error = 492.1484539134339

Tree 18 of 38

(CSIMILIS25:71.1964642048464,(IGIGUANA23:54.87727311690467,(((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)24:37.416786534813454)89:0.0)71;

Squared error = 492.1484539134339

Tree 19 of 38

((CSIMILIS25:71.1964642048464,(((SOOBESUS07:16.105369580641334,(SHISPIDUS1:8.57737380673966,SAVARIUS06:11.724908478422956)20:7.584820344743772)23:4.279339278686592,(SASLEVIN13:14.84336313814439,(SAUSTRALI9:11.344663866356738,SAKLAUBE10:14.130057522064961)25:4.683068269248144)19:6.0487538833751415)17:1.231836069824462,((SOTOWNSE22:18.968503011498925,SOOBESUS16:10.672898274202474)29:0.6993582651178436,SOTUMIDU18:13.60414548313937)14:13.633071052623361)24:37.416786534813454)104:54.87727311690467,IGIGUANA23:0.0)56;

Squared error = 492.1484539134339

Tree 20 of 38

(((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:0.0)9;

Squared error = 586.8972553456832

Tree 21 of 38

((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,(SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0)6;

Squared error = 586.8972553456832

Tree 22 of 38

((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,(((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)20:0.0)49;

Squared error = 586.8972553456832

Tree 23 of 38

((((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,SOOBESUS07:18.55181581074345)19:6.1730178188724025,SASLEVIN13:14.84336313814438)24:0.0,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)9;

Squared error = 586.8972553456832

Tree 24 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,SOOBESUS07:18.55181581074345)19:6.1730178188724025,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:0.0)14;

Squared error = 586.8972553456832

Tree 25 of 38

(((((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,SOOBESUS07:18.55181581074345)19:6.1730178188724025,SASLEVIN13:14.84336313814438)24:4.683068269248129,SAKLAUBE10:14.130057522064979)21:0.0,SAUSTRALI9:11.344663866356727)13;

Squared error = 586.8972553456832

Tree 26 of 38

((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134)51:13.550305657959322,SOOBESUS16:11.262824366329708)24:0.0,(SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562)6;

Squared error = 586.8972553456832

Tree 27 of 38

((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134)51:13.550305657959322,(SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562)18:0.0,SOOBESUS16:11.262824366329708)12;

Squared error = 586.8972553456832

Tree 28 of 38

(((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134)51:13.550305657959322,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:0.0)18;

Squared error = 586.8972553456832

Tree 29 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0)12:10.730251212017956,SAVARIUS06:11.724908478422957)20:0.0,SHISPIDUS1:8.577373806739658)10;

Squared error = 586.8972553456832

Tree 30 of 38

((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0)12:10.730251212017956,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:0.0)10;

Squared error = 586.8972553456832

Tree 31 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134)51:13.550305657959322,SOOBESUS16:11.262824366329708)24:0.9476544491099562,SOTOWNSE22:18.8213645320962)22:0.0,SOTUMIDU18:12.91306168642275)15;

Squared error = 586.8972553456832

Tree 32 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134)51:13.550305657959322,SOOBESUS16:11.262824366329708)24:0.9476544491099562,SOTUMIDU18:12.91306168642275)17:0.0,SOTOWNSE22:18.8213645320962)20;

Squared error = 586.8972553456832

Tree 33 of 38

((((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,SOOBESUS07:18.55181581074345)19:6.1730178188724025,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)16:14.84336313814438,SASLEVIN13:0.0)17;

Squared error = 586.8972553456832

Tree 34 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)12:18.55181581074345,SOOBESUS07:0.0)21;

Squared error = 586.8972553456832

Tree 35 of 38

(((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0)12:10.730251212017956,SHISPIDUS1:8.577373806739658)18:11.724908478422957,SAVARIUS06:0.0)12;

Squared error = 586.8972553456832

Tree 36 of 38

(((((((CSIMILIS25:71.1964642048463,IGIGUANA23:54.87727311690462)115:37.416786534813525,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)60:1.8531557473107134,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)16:0.0,SOOBESUS07:18.55181581074345)19:6.1730178188724025,SASLEVIN13:14.84336313814438)24:4.683068269248129,SAUSTRALI9:11.344663866356727)18:14.130057522064979,SAKLAUBE10:0.0)16;

Squared error = 586.8972553456832

Tree 37 of 38

((CSIMILIS25:71.1964642048463,(((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)20:37.416786534813525)108:54.87727311690462,IGIGUANA23:0.0)56;

Squared error = 586.8972553456832

Tree 38 of 38

(CSIMILIS25:0.0,(IGIGUANA23:54.87727311690462,(((SOOBESUS07:18.55181581074345,(SASLEVIN13:14.84336313814438,(SAUSTRALI9:11.344663866356727,SAKLAUBE10:14.130057522064979)25:4.683068269248129)19:6.1730178188724025)27:0.0,(SHISPIDUS1:8.577373806739658,SAVARIUS06:11.724908478422957)20:10.730251212017956)13:1.8531557473107134,((SOTOWNSE22:18.8213645320962,SOTUMIDU18:12.91306168642275)31:0.9476544491099562,SOOBESUS16:11.262824366329708)12:13.550305657959322)20:37.416786534813525)93:71.1964642048463)71;

Squared error = 586.8972553456832


259  msec preprocessing
3194  msec calculation
7171  msec postprocessing
10624  msec total

Powered by Parallel Java:   http://www.cs.rit.edu/~ark/pj.shtml
Developed by Alan Kaminsky:   http://www.cs.rit.edu/~ark/